@Friznit Think Sav is confusing things - you only need that if you have a totally separate ArmA3 install which you're using for HC's
I run everything from a single installation of ArmA3. In your case E:\Games\Steam\SteamApps\common\Arma 3
You can run ArmA3.exe -client and arma3server.exe from the same installation quite happily. Only need to install the mods in that folder.
Ok, so I need copies of my mods in what folder?
Because if its pulling from my main Arma game folder..something isn't working because it says I have a version mismatch when the HC joins the server.
What folder should I put copies of the mods I'm using for that mission into so the HC can access them?
Should the bat files and mods all be in the same folder?